Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-642b in AC Brain Sun Cluster 1 Table contains all genes in the AC Brain Sun cluster number 1. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-642b 811 CALR calreticulin [Source:HGNC Symbol;Acc:1455] zzz999 8968 HIST1H3J histone cluster 1, H3j [Source:HGNC Symbol;Acc:4774] zzz999 6334 SCN8A sodium channel, voltage gated, type VIII, alpha subunit [Source:HGNC Symbol;Acc:10596] zzz999 665 BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like [Source:HGNC Symbol;Acc:1085] zzz999 85450 ITPRIP inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:29370] zzz999 1053 CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon [Source:HGNC Symbol;Acc:1836] zzz999 2634 GBP2 guanylate binding protein 2, interferon-inducible [Source:HGNC Symbol;Acc:4183] zzz999 79927 GRRP1 glycine/arginine rich protein 1 [Source:HGNC Symbol;Acc:25860] zzz999 5989 RFX1 regulatory factor X, 1 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9982] zzz999 7905 REEP5 receptor accessory protein 5 [Source:HGNC Symbol;Acc:30077] zzz999 54819 ZCCHC10 zinc finger, CCHC domain containing 10 [Source:HGNC Symbol;Acc:25954] zzz999 54778 RNF111 ring finger protein 111 [Source:HGNC Symbol;Acc:17384] zzz999 90268 FAM105B family with sequence similarity 105, member B [Source:HGNC Symbol;Acc:25118] T 10570 DPYSL4 dihydropyrimidinase-like 4 [Source:HGNC Symbol;Acc:3016] zzz999 60386 SLC25A19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:HGNC Symbol;Acc:14409] T 221091 LRRN4CL LRRN4 C-terminal like [Source:HGNC Symbol;Acc:33724] zzz999 10371 SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:HGNC Symbol;Acc:10723] T 26219 OR1J4 olfactory receptor, family 1, subfamily J, member 4 [Source:HGNC Symbol;Acc:8211] zzz999 55769 ZNF83 zinc finger protein 83 [Source:HGNC Symbol;Acc:13158] zzz999 11064 CEP110 centrosomal protein 110kDa [Source:HGNC Symbol;Acc:1858] zzz999 353345 GPR141 G protein-coupled receptor 141 [Source:HGNC Symbol;Acc:19997] zzz999 51164 DCTN4 dynactin 4 (p62) [Source:HGNC Symbol;Acc:15518] zzz999 64417 C5orf28 chromosome 5 open reading frame 28 [Source:HGNC Symbol;Acc:26139] T 55699 IARS2 isoleucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:29685] zzz999 85019 C18orf45 chromosome 18 open reading frame 45 [Source:HGNC Symbol;Acc:31723] zzz999 65264 UBE2Z ubiquitin-conjugating enzyme E2Z [Source:HGNC Symbol;Acc:25847] T 23180 RFTN1 raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:30278] T 5422 POLA1 polymerase (DNA directed), alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:9173] T 9128 PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:HGNC Symbol;Acc:17349] zzz999 2863 GPR39 G protein-coupled receptor 39 [Source:HGNC Symbol;Acc:4496] zzz999 8204 NRIP1 nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:8001] T 1455 CSNK1G2 casein kinase 1, gamma 2 [Source:HGNC Symbol;Acc:2455] zzz999 94101 ORMDL1 ORM1-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:16036] zzz999 813 CALU calumenin [Source:HGNC Symbol;Acc:1458] T 84667 HES7 hairy and enhancer of split 7 (Drosophila) [Source:HGNC Symbol;Acc:15977] P T 54974 THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:26053] zzz999 8660 IRS2 insulin receptor substrate 2 [Source:HGNC Symbol;Acc:6126] T 11144 DMC1 DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) [Source:HGNC Symbol;Acc:2927] zzz999 7262 PHLDA2 pleckstrin homology-like domain, family A, member 2 [Source:HGNC Symbol;Acc:12385] zzz999 9659 PDE4DIP phosphodiesterase 4D interacting protein [Source:HGNC Symbol;Acc:15580] T 3685 ITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) [Source:HGNC Symbol;Acc:6150] zzz999 23268 DNMBP dynamin binding protein [Source:HGNC Symbol;Acc:30373] zzz999 159013 CXorf38 chromosome X open reading frame 38 [Source:HGNC Symbol;Acc:28589] zzz999 8354 HIST1H3J histone cluster 1, H3j [Source:HGNC Symbol;Acc:4774] zzz999 171023 ASXL1 additional sex combs like 1 (Drosophila) [Source:HGNC Symbol;Acc:18318] T 389792 IER5L immediate early response 5-like [Source:HGNC Symbol;Acc:23679] T 25782 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) [Source:HGNC Symbol;Acc:17168] zzz999 7110 TMF1 TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:11870] zzz999 115572 FAM46B family with sequence similarity 46, member B [Source:HGNC Symbol;Acc:28273] T 285605 DTWD2 DTW domain containing 2 [Source:HGNC Symbol;Acc:19334] zzz999 1984 EIF5A eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:3300] T 2247 FGF2 fibroblast growth factor 2 (basic) [Source:HGNC Symbol;Acc:3676] zzz999 3626 INHBC inhibin, beta C [Source:HGNC Symbol;Acc:6068] T 6138 RPL15 ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] zzz999 84433 CARD11 caspase recruitment domain family, member 11 [Source:HGNC Symbol;Acc:16393] zzz999 717 C2 complement component 2 [Source:HGNC Symbol;Acc:1248] zzz999 10736 SIX2 SIX homeobox 2 [Source:HGNC Symbol;Acc:10888] T 9877 ZC3H11A zinc finger CCCH-type containing 11A [Source:HGNC Symbol;Acc:29093] T 22862 FNDC3A fibronectin type III domain containing 3A [Source:HGNC Symbol;Acc:20296] zzz999 55341 LSG1 large subunit GTPase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25652] zzz999 79823 CAMKMT calmodulin-lysine N-methyltransferase [Source:HGNC Symbol;Acc:26276] zzz999 2589 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) [Source:HGNC Symbol;Acc:4123] zzz999 79892 MCMBP minichromosome maintenance complex binding protein [Source:HGNC Symbol;Acc:25782] T 8869 ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:HGNC Symbol;Acc:10872] T 3693 ITGB5 integrin, beta 5 [Source:HGNC Symbol;Acc:6160] zzz999 79002 C19orf43 chromosome 19 open reading frame 43 [Source:HGNC Symbol;Acc:28424] zzz999 25896 INTS7 integrator complex subunit 7 [Source:HGNC Symbol;Acc:24484] zzz999 80216 ALPK1 alpha-kinase 1 [Source:HGNC Symbol;Acc:20917] T 182 JAG1 jagged 1 [Source:HGNC Symbol;Acc:6188] T 23383 MAU2 MAU2 chromatid cohesion factor homolog (C. elegans) [Source:HGNC Symbol;Acc:29140] T 23137 SMC5 structural maintenance of chromosomes 5 [Source:HGNC Symbol;Acc:20465] T 8484 GALR3 galanin receptor 3 [Source:HGNC Symbol;Acc:4134] zzz999 6747 SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) [Source:HGNC Symbol;Acc:11325] zzz999 5210 PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:8875] T 151888 BTLA B and T lymphocyte associated [Source:HGNC Symbol;Acc:21087] zzz999 29080 CCDC59 coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:25005] zzz999 90141 EFCAB11 EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:20357] zzz999 81569 ACTL8 actin-like 8 [Source:HGNC Symbol;Acc:24018] zzz999 55365 TMEM176A transmembrane protein 176A [Source:HGNC Symbol;Acc:24930] zzz999 4478 MSN moesin [Source:HGNC Symbol;Acc:7373] zzz999 81537 SGPP1 sphingosine-1-phosphate phosphatase 1 [Source:HGNC Symbol;Acc:17720] zzz999 23327 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like [Source:HGNC Symbol;Acc:7728] zzz999 54732 TMED9 transmembrane emp24 protein transport domain containing 9 [Source:HGNC Symbol;Acc:24878] zzz999 164091 PAQR7 progestin and adipoQ receptor family member VII [Source:HGNC Symbol;Acc:23146] T 57674 RNF213 ring finger protein 213 [Source:HGNC Symbol;Acc:14539] T 6169 RPL38 ribosomal protein L38 [Source:HGNC Symbol;Acc:10349] zzz999 2734 GLG1 golgi glycoprotein 1 [Source:HGNC Symbol;Acc:4316] zzz999 9578 CDC42BPB CDC42 binding protein kinase beta (DMPK-like) [Source:HGNC Symbol;Acc:1738] T 10801 SEPT9 septin 9 [Source:HGNC Symbol;Acc:7323] zzz999 79818 ZNF552 zinc finger protein 552 [Source:HGNC Symbol;Acc:26135] zzz999 55500 ETNK1 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:24649] T 51061 TXNDC11 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:28030] zzz999 89849 ATG16L2 ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:25464] zzz999 283431 GAS2L3 growth arrest-specific 2 like 3 [Source:HGNC Symbol;Acc:27475] zzz999 54469 ZFAND6 zinc finger, AN1-type domain 6 [Source:HGNC Symbol;Acc:30164] T 162394 SLFN5 schlafen family member 5 [Source:HGNC Symbol;Acc:28286] T 1386 ATF2 activating transcription factor 2 [Source:HGNC Symbol;Acc:784] zzz999

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